STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0912PFAM: NUDIX hydrolase; KEGG: sat:SYN_02072 MutT/NUDIX family protein. (146 aa)    
Predicted Functional Partners:
Taci_0210
KEGG: eli:ELI_01925 hypothetical protein.
  
     0.641
Taci_0913
PFAM: Formiminotransferase-cyclodeaminase; KEGG: met:M446_6555 formiminotransferase- cyclodeaminase.
       0.590
Taci_0504
KEGG: oca:OCAR_5226 hypothetical protein.
  
     0.558
hutI
KEGG: sfu:Sfum_2377 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3.
       0.492
Taci_0915
KEGG: sus:Acid_5208 glutamate formiminotransferase; TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase domain protein.
       0.492
Taci_0496
PFAM: peptidase M16 domain protein; KEGG: saz:Sama_3596 pseudouridine synthase, Rsu; Belongs to the peptidase M16 family.
  
     0.419
hisI
TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: son:SO_2067 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; In the N-terminal section; belongs to the PRA-CH family.
     
 0.400
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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