STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_0969PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pol:Bpro_4414 BFD-like (2Fe-2S)-binding region. (108 aa)    
Predicted Functional Partners:
Taci_0970
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: lip:LI1064 Fe-S-cluster-containing hydrogenase components 1.
  
 0.988
Taci_0968
PFAM: FAD dependent oxidoreductase; KEGG: scl:sce0669 sarcosine oxidase, beta subunit.
 
    0.954
Taci_0971
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: bph:Bphy_4832 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.947
Taci_0972
KEGG: bcz:BCZK2563 sarcosine oxidase, alpha subunit.
 
  
 0.945
Taci_1125
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: gur:Gura_0869 rubredoxin-type Fe(Cys)4 protein.
  
 
 0.910
Taci_0043
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dvm:DvMF_2767 uroporphyrin-III C- methyltransferase.
  
  
 0.609
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.593
Taci_0974
PFAM: protein of unknown function UPF0079; KEGG: dps:DP1956 hypothetical protein.
       0.489
nnr
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (By similarity). In the N-terminal section; belongs to the NnrE/AIBP family.
       0.475
Taci_0973
PFAM: peptidase M22 glycoprotease; KEGG: pzu:PHZ_c3457 metal-dependent protease (with possible chaperone activity).
       0.469
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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