STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1044Hypothetical protein. (200 aa)    
Predicted Functional Partners:
Taci_1046
PFAM: Fimbrial assembly family protein; KEGG: gsu:GSU2031 type IV pilus biogenesis protein PilN.
       0.821
Taci_1047
KEGG: ade:Adeh_0641 type IV pilus assembly protein PilM.
       0.818
Taci_1043
PFAM: type II and III secretion system protein; NolW domain protein; KEGG: sfu:Sfum_0540 type IV pilus secretin PilQ; Belongs to the bacterial secretin family.
       0.790
Taci_1045
Hypothetical protein.
       0.773
Taci_1048
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; KEGG: dac:Daci_2885 fimbrial assembly protein.
       0.743
Taci_1049
Hypothetical protein.
       0.723
Taci_1050
Hypothetical protein.
       0.701
Taci_1051
Hypothetical protein; KEGG: pap:PSPA7_2034 general secretion pathway protein I.
       0.701
Taci_1052
Hypothetical protein; KEGG: shn:Shewana3_0154 general secretion pathway protein G.
       0.688
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.589
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.