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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Taci_1135KEGG: dds:Ddes_0115 betaine reductase. (510 aa)    
Predicted Functional Partners:
Taci_1134
PFAM: fatty acid synthesis plsX protein; KEGG: dds:Ddes_0116 glycine reductase.
  
 0.998
Taci_1136
Contains selenocysteine; TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; glycine reductase, selenoprotein B; PFAM: Selenoprotein B glycine/betaine/sarcosine/D- proline reductase; KEGG: dds:Ddes_0113 selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.
 
   
 0.897
Taci_1137
PFAM: glycine reductase complex selenoprotein A; KEGG: dds:Ddes_0118 glycine reductase; Contains selenocysteine.
 
   
 0.891
Taci_1138
PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: dds:Ddes_0112 sarcosine reductase.
 
   
 0.857
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.837
Taci_1140
KEGG: ppr:PBPRB1542 GrdX protein; Contains selenocysteine.
 
   
 0.833
Taci_1098
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: pca:Pcar_1437 malonyl CoA-acyl carrier protein transacylase.
  
  
 0.826
Taci_1095
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.789
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.707
rplC
Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
   
    0.658
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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