Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Taci_1201Conserved hypothetical protein; KEGG: gbm:Gbem_0158 radical SAM domain protein. (212 aa)    
Predicted Functional Partners:
Taci_1202
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_2585 Fe-S oxidoreductase.
 
    0.956
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.820
Taci_1198
PFAM: Methyltransferase type 11; methyltransferase small; KEGG: sat:SYN_01006 methyltransferase.
       0.820
smc
SMC domain protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.820
Taci_1200
Ribonuclease, Rne/Rng family; KEGG: pca:Pcar_2584 RNase EG; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein.
       0.820
Taci_0878
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: afw:Anae109_3766 radical SAM domain- containing protein.
 
    0.734
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.730
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
 
     0.724
Taci_1209
PFAM: Rod shape-determining protein MreC; KEGG: gbm:Gbem_2462 rod shape-determining protein MreC.
 
     0.665
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
       0.658
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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