STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1271PFAM: protein of unknown function DUF72; KEGG: gbm:Gbem_2197 protein of unknown function DUF72. (284 aa)    
Predicted Functional Partners:
Taci_1267
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bcm:Bcenmc03_5521 HAD family hydrolase.
 
     0.632
Taci_1270
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: afw:Anae109_1887 putative 6-pyruvoyl tetrahydropterin synthase.
       0.589
Taci_1265
Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.573
Taci_1266
Hypothetical protein; KEGG: rlt:Rleg2_1990 efflux transporter, RND family, MFP subunit.
       0.573
Taci_1268
KEGG: azo:azo0598 SAM dependent methyl transferase.
       0.558
folE2
Protein of unknown function DUF198; Converts GTP to 7,8-dihydroneopterin triphosphate.
       0.558
Taci_1272
PFAM: glutamine synthetase catalytic region; KEGG: dde:Dde_0102 glutamine synthetase, type III.
       0.517
Taci_1264
PFAM: DivIVA family protein; KEGG: bha:BH2546 cell-division initiation protein (septum placement).
       0.422
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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