Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Taci_1274PFAM: S-layer domain protein; KEGG: bat:BAS1683 N-acetylmuramoyl-L-alanine amidase. (485 aa)    
Predicted Functional Partners:
Taci_1295
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gme:Gmet_2357 surface antigen (D15).
 
   
 0.820
Taci_1288
PFAM: permease YjgP/YjgQ family protein; KEGG: permease YjgP/YjgQ family protein.
 
     0.812
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
 
     0.793
Taci_1245
PFAM: OstA family protein; KEGG: gbm:Gbem_3347 organic solvent tolerance protein.
 
   
 0.790
Taci_0488
PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_0702 protein of unknown function DUF214; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.785
Taci_0658
Uncharacterized protein with myosin-like protein domain; KEGG: hypothetical protein.
 
     0.776
Taci_1249
Hypothetical protein; KEGG: aba:Acid345_4431 PEGA domain protein.
  
     0.774
Taci_0682
PFAM: outer membrane chaperone Skp (OmpH); KEGG: rce:RC1_1199 outer membrane protein OmpH precursor.
  
     0.773
Taci_0307
Hypothetical protein; KEGG: sil:SPO2801 lipopolysaccharide core biosynthesis mannosyltransferase.
  
     0.769
Taci_0483
Hypothetical protein.
  
     0.766
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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