STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1275PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: gur:Gura_1560 rhodanese domain-containing protein. (356 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
  
 0.927
Taci_0746
PFAM: aminotransferase class I and II; KEGG: gur:Gura_2501 aminotransferase, class I and II.
     
 0.905
Taci_1423
PFAM: aminotransferase class I and II; KEGG: ypm:YP_2630 putative aminotransferase.
     
 0.900
Taci_1734
TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pca:Pcar_2430 cysteine synthase A.
  
 
 0.844
Taci_0176
TIGRFAM: redox-active disulfide protein 2; KEGG: dps:DP0946 hypothetical protein.
    
 0.719
Taci_1276
PFAM: O-antigen polymerase; KEGG: ccs:CCNA_00164 O-antigen polymerase.
       0.648
Taci_1277
PFAM: protein of unknown function DUF1022; KEGG: mch:Mchl_1220 protein of unknown function DUF1022.
       0.648
Taci_1279
PFAM: iron-containing alcohol dehydrogenase; KEGG: met:M446_1233 iron-containing alcohol dehydrogenase.
  
    0.599
Taci_0103
PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; FAD dependent oxidoreductase; SMART: Rhodanese domain protein; KEGG: gme:Gmet_3484 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 0.596
Taci_1278
Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: sat:SYN_02056 DegT/DnrJ/eryC1/StrS aminotransferase family protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.590
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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