STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1332PFAM: Lytic transglycosylase catalytic; KEGG: bsu:BSU11570 hypothetical protein. (194 aa)    
Predicted Functional Partners:
Taci_1334
ATPase, FliI/YscN family; KEGG: pca:Pcar_1189 flagellum-specific ATP synthase FliI; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase.
  
  
 0.901
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: bba:Bd3405 hypothetical protein.
  
  
 0.885
Taci_1335
PFAM: flagellar assembly protein FliH; KEGG: bha:BH2456 flagellar assembly protein H.
 
  
 0.872
Taci_1337
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
    0.849
Taci_1322
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bsu:BSU16320 flagellar motor switch protein.
  
  
 0.839
Taci_1330
PFAM: flagellar hook-length control protein; KEGG: bra:BRADO5895 putative flagellar hook length determination protein.
  
    0.836
Taci_1336
TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: bha:BH2457 flagellar motor switch protein G.
 
    0.836
Taci_1331
KEGG: bha:BH2453 hypothetical protein.
  
    0.817
Taci_1333
KEGG: hypothetical LOC100067330.
       0.773
Taci_1329
PFAM: flagellar hook capping protein; KEGG: lip:LI0567 flagellar hook capping protein.
  
  
 0.766
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.