STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1357Hypothetical protein; KEGG: psa:PST_3384 thiol:disulfide interchange protein precursor. (218 aa)    
Predicted Functional Partners:
Taci_1356
Hypothetical protein.
       0.773
Taci_1350
PFAM: protein of unknown function UPF0102; KEGG: sat:SYN_00772 endonuclease; Belongs to the UPF0102 family.
  
    0.573
Taci_1348
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: glo:Glov_3267 DNA protecting protein DprA.
       0.561
Taci_1349
Mg chelatase, subunit ChlI; KEGG: maq:Maqu_0525 fis family transcriptional regulator; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
       0.561
Taci_1351
Flagellar protein with uncharacterized cytoplasmic FhlB domain-like protein; KEGG: dps:DP2484 flagellar biosynthetic protein (FlhB).
       0.561
Taci_1352
Hypothetical protein.
       0.561
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.561
Taci_1354
GTP-binding protein HSR1-related protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.561
Taci_1355
KEGG: pca:Pcar_1617 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; Belongs to the peptidase S26 family.
       0.561
Taci_0056
PFAM: zinc/iron permease; KEGG: dvm:DvMF_1916 zinc/iron permease.
   
    0.499
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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