STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1369TIGRFAM: citrate lyase acyl carrier protein; KEGG: eca:ECA2573 citrate lyase subunit gamma. (89 aa)    
Predicted Functional Partners:
Taci_1371
KEGG: gbm:Gbem_3858 citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit.
 
 
 0.988
Taci_0022
KEGG: rfr:Rfer_2409 citrate lyase subunit gamma.
  
  
  0.975
Taci_0339
KEGG: rfr:Rfer_2409 citrate lyase subunit gamma.
  
  
  0.975
Taci_1370
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: ppr:PBPRA2293 putative citrate lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.964
Taci_0024
KEGG: ppd:Ppro_1084 citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit.
 
 
 0.941
Taci_0341
KEGG: ppd:Ppro_1084 citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit.
 
 
 0.941
Taci_1673
KEGG: ppd:Ppro_1088 citrate lyase ligase; TIGRFAM: citrate lyase ligase; cytidyltransferase- related domain protein; PFAM: Citrate lyase ligase domain protein; GCN5- related N-acetyltransferase; cytidylyltransferase; SMART: Citrate lyase ligase domain protein.
 
  
 0.932
Taci_0595
PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: yen:YE2648 2-(5''-triphosphoribosyl)-3'- dephosphocoenzyme-A synthase.
 
  
 0.917
Taci_1671
Phosphoribosyl-dephospho-CoA transferase (holo- ACP synthetase)-like protein; KEGG: ppd:Ppro_1083 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.
 
  
 0.884
Taci_0023
Citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; KEGG: gbm:Gbem_3859 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.813
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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