STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1385TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dal:Dalk_3729 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (380 aa)    
Predicted Functional Partners:
Taci_1383
PFAM: acriflavin resistance protein; KEGG: dal:Dalk_3731 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.990
Taci_1525
PFAM: outer membrane efflux protein; KEGG: sat:SYN_02462 type I secretion outer membrane protein.
 
 0.986
Taci_1384
PFAM: outer membrane efflux protein; KEGG: dal:Dalk_3730 outer membrane efflux protein.
 
 0.974
Taci_0030
PFAM: acriflavin resistance protein; KEGG: ade:Adeh_1476 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.965
Taci_0164
KEGG: outer membrane protein-like protein.
  
 
 0.775
Taci_1382
PFAM: regulatory protein TetR; KEGG: mlo:mlr3102 transcriptional regulator.
  
  
 0.757
Taci_1380
KEGG: gur:Gura_1006 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
   
 0.542
Taci_1381
PFAM: protein of unknown function DUF182; KEGG: sus:Acid_5850 hypothetical protein.
  
    0.476
Taci_1379
PFAM: Phosphoglycerate mutase; KEGG: pca:Pcar_0229 fructose-2,6-bisphosphatase.
       0.473
Taci_1372
KEGG: bvi:Bcep1808_5667 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; CHASE4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAC repeat-containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein.
  
  
 0.419
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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