STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1394PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO0979 high-affinity branched-chain amino acid ABC transporter ATP-bincing protein. (255 aa)    
Predicted Functional Partners:
Taci_1395
PFAM: inner-membrane translocator; KEGG: rpb:RPB_2083 inner-membrane translocator ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
Taci_0685
PFAM: inner-membrane translocator; KEGG: gbm:Gbem_1944 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Taci_1427
PFAM: inner-membrane translocator; KEGG: ade:Adeh_4259 ABC branched-chain amino acid transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Taci_0637
PFAM: inner-membrane translocator; KEGG: btr:Btr_1146 permease protein of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
Taci_1396
PFAM: inner-membrane translocator; KEGG: gbm:Gbem_1943 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
Taci_0686
PFAM: inner-membrane translocator; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.972
Taci_1428
PFAM: inner-membrane translocator; KEGG: dds:Ddes_0473 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.972
Taci_0636
PFAM: inner-membrane translocator; KEGG: dds:Ddes_1066 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.969
Taci_1392
PFAM: Extracellular ligand-binding receptor; KEGG: bba:Bd3385 branched-chain amino acid ABC transporter, amino acid-binding protein.
 
  
 0.918
Taci_1393
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_0838 ABC transporter related.
 
  
0.904
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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