STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1460Transcriptional antiterminator, BglG; PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: bha:BH0845 transcriptional antiterminator. (285 aa)    
Predicted Functional Partners:
Taci_1459
TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; sugar- specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; KEGG: bha:BH0844 PTS system, glucose-specific enzyme II, A component.
 
 
 0.993
Taci_0332
PFAM: phosphotransferase system lactose/cellobiose- specific IIB subunit; KEGG: bat:BAS5064 PTS system, cellobiose-specific IIB component.
 
  
 0.821
Taci_0234
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: cvi:CV_0980 phosphoenolpyruvate-protein phosphotransferase.
 
 
 
 0.802
Taci_1683
PTS modulated transcriptional regulator, MtlR family; PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; Helix- turn-helix type 11 domain protein; KEGG: bcy:Bcer98_1169 transcriptional antiterminator, BglG.
 
  
 0.782
Taci_1461
Magnesium transporter; Acts as a magnesium transporter.
       0.639
Taci_0235
KEGG: ypb:YPTS_2252 hypothetical protein.
  
     0.416
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.