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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1468PFAM: cation transporter; KEGG: dde:Dde_2029 K+ transporter trk. (483 aa)    
Predicted Functional Partners:
Taci_1469
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pla:Plav_3126 potassium transporter peripheral membrane component.
 
 
 0.992
Taci_0064
PFAM: TrkA-N domain protein; TrkA-C domain protein; Ion transport 2 domain protein; KEGG: aba:Acid345_3283 TrkA-N.
  
 
 0.834
Taci_0728
PFAM: TrkA-N domain protein; TrkA-C domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bha:BH2663 potassium uptake protein.
  
 
 0.834
Taci_1470
Pyrimidine dimer DNA glycosylase /DNA-(apurinic or apyrimidinic site) lyase; KEGG: mca:MCA0704 hypothetical protein.
       0.512
Taci_1467
TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: eba:p2A97 putative periplasmic binding protein.
       0.448
Taci_1436
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sus:Acid_6996 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
   
 
 0.407
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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