STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1497KEGG: noc:Noc_0055 hypothetical protein. (158 aa)    
Predicted Functional Partners:
Taci_1491
PFAM: PglZ domain protein; KEGG: dol:Dole_0434 alkaline phosphatase domain- containing protein.
     0.959
Taci_0002
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 0.947
Taci_1496
KEGG: dno:DNO_0181 hypothetical protein.
 
 
 0.945
Taci_1492
PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase; KEGG: dno:DNO_0177 DEAD helicase domain-containing protein VrlO.
 
 0.900
Taci_1079
DNA polymerase I; KEGG: bcy:Bcer98_3272 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; Helix-hairpin-helix domain protein class 2.
   
 0.893
Taci_1494
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: dno:DNO_0180 S-adenosyl-L-methionine- dependent methyltransferases family protein VrlL.
 
     0.890
Taci_1490
KEGG: dol:Dole_0433 hypothetical protein.
 
     0.866
Taci_1498
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; Prophage CP4-57 regulatory; KEGG: sat:SYN_01853 MerR family regulatory protein.
 
     0.840
dnaX
DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 
 0.786
Taci_0699
PFAM: DNA polymerase III delta; KEGG: pmy:Pmen_3788 DNA polymerase III subunit delta.
    
 
 0.776
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.