Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Taci_1518PFAM: periplasmic binding protein; KEGG: noc:Noc_0840 periplasmic binding protein. (315 aa)    
Predicted Functional Partners:
Taci_1520
PFAM: transport system permease protein; KEGG: noc:Noc_0838 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.979
Taci_1519
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A0491 ABC transporter component.
 
  
 0.946
Taci_0526
PFAM: transport system permease protein; KEGG: dps:DP0215 Fe(III) ABC-transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.910
Taci_1521
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsh:Dshi_0569 MotA/TolQ/ExbB proton channel.
  
  
 0.808
Taci_1522
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bma:BMAA1803 biopolymer ExbD/TolR family transporter.
  
  
 0.787
Taci_1523
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: cvi:CV_0400 hypothetical protein.
  
  
 0.783
Taci_0053
PFAM: periplasmic binding protein; KEGG: dal:Dalk_0443 periplasmic binding protein.
  
  
 0.778
Taci_0527
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ade:Adeh_3466 ABC cobalamin/Fe3+-siderophores transporter, ATPase subunit.
 
  
 0.726
Taci_1516
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: wsu:WS1120 putative transcriptional regulator.
       0.472
Taci_1517
TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: dds:Ddes_1265 heavy metal translocating P- type ATPase.
       0.472
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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