Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Taci_1521PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsh:Dshi_0569 MotA/TolQ/ExbB proton channel. (206 aa)    
Predicted Functional Partners:
Taci_1522
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bma:BMAA1803 biopolymer ExbD/TolR family transporter.
 
 
 0.998
Taci_1523
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: cvi:CV_0400 hypothetical protein.
 
 
 0.988
Taci_1518
PFAM: periplasmic binding protein; KEGG: noc:Noc_0840 periplasmic binding protein.
  
  
 0.808
Taci_1520
PFAM: transport system permease protein; KEGG: noc:Noc_0838 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.777
Taci_1519
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A0491 ABC transporter component.
  
  
 0.766
Taci_1524
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cko:CKO_03025 vitamin B12/cobalamin outer membrane transporter.
 
   
 0.650
Taci_1288
PFAM: permease YjgP/YjgQ family protein; KEGG: permease YjgP/YjgQ family protein.
  
     0.645
Taci_1236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1888 ABC transporter, ATP-binding protein.
 
   
 0.640
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.558
Taci_1295
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gme:Gmet_2357 surface antigen (D15).
  
   
 0.541
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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