Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Taci_1524PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cko:CKO_03025 vitamin B12/cobalamin outer membrane transporter. (605 aa)    
Predicted Functional Partners:
Taci_1523
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: cvi:CV_0400 hypothetical protein.
 
 
 
 0.884
Taci_1525
PFAM: outer membrane efflux protein; KEGG: sat:SYN_02462 type I secretion outer membrane protein.
 
   
 0.706
Taci_1521
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsh:Dshi_0569 MotA/TolQ/ExbB proton channel.
 
   
 0.650
Taci_1288
PFAM: permease YjgP/YjgQ family protein; KEGG: permease YjgP/YjgQ family protein.
  
     0.617
Taci_1522
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bma:BMAA1803 biopolymer ExbD/TolR family transporter.
 
   
 0.614
Taci_1384
PFAM: outer membrane efflux protein; KEGG: dal:Dalk_3730 outer membrane efflux protein.
  
   
 0.569
Taci_1295
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gme:Gmet_2357 surface antigen (D15).
  
   
 0.531
Taci_0141
PFAM: homocysteine S-methyltransferase; cobalamin B12-binding domain protein; Methionine synthase B12- binding module cap domain protein; dihydropteroate synthase DHPS; KEGG: gsu:GSU2921 5-methyltetrahydrofolate- homocysteine methyltransferase, truncation.
     
 0.525
Taci_0829
PFAM: peptidase M48 Ste24p; KEGG: gme:Gmet_1238 peptidase M48, Ste24p.
  
     0.513
Taci_1707
PFAM: glycosyl transferase family 9; KEGG: bac:BamMC406_6399 glycosyl transferase family protein.
  
     0.508
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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