Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Taci_1546Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bca:BCE_0370 hypothetical protein. (73 aa)    
Predicted Functional Partners:
Taci_1544
PFAM: restriction modification system DNA specificity domain; KEGG: sfr:Sfri_1954 restriction modification system DNA specificity domain.
 
     0.815
Taci_1543
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.790
Taci_1545
TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: vei:Veis_2421 type I restriction-modification system, M subunit.
       0.790
Taci_1542
Hypothetical protein.
       0.678
Taci_1540
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cha:CHAB381_0329 mercuric transport protein periplasmic component.
 
     0.539
Taci_1541
PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: dvm:DvMF_0793 methyl-accepting chemotaxis sensory transducer.
       0.433
Taci_1547
Glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: acp:A2cp1_4408 glutamine synthetase, type I.
       0.426
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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