STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1579PFAM: flavin reductase domain protein FMN-binding; KEGG: sat:SYN_02123 ferric-chelate reductase / rubredoxin. (176 aa)    
Predicted Functional Partners:
Taci_0102
PFAM: Rubrerythrin; KEGG: dde:Dde_1320 rubrerythrin, putative.
    
 0.914
Taci_0286
PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cha:CHAB381_0232 flavodoxin.
    
 0.904
Taci_1578
KEGG: sfu:Sfum_0347 hypothetical protein.
       0.821
Taci_1580
Ferroxidase; Iron-storage protein.
       0.661
Taci_1577
Hypothetical protein.
       0.545
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.445
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.436
Taci_1575
PFAM: CHAD domain containing protein; KEGG: mxa:MXAN_0861 CHAD domain protein.
       0.413
Taci_1573
PFAM: Ppx/GppA phosphatase; KEGG: gme:Gmet_0880 Ppx/GppA phosphatase.
       0.410
Taci_1574
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: gme:Gmet_0880 Ppx/GppA phosphatase.
       0.410
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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