STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Taci_1604KEGG: rso:RSc0048 putative transcription regulator protein; Belongs to the Fur family. (144 aa)    
Predicted Functional Partners:
Taci_1601
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afw:Anae109_1572 molybdate ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
     
 0.790
Taci_1602
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pca:Pcar_0230 molybdate porter.
       0.788
Taci_1603
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: saz:Sama_3529 molybdenum ABC transporter, periplasmic molybdenum-binding protein.
       0.775
Taci_1600
Molybdopterin binding domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.727
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.714
Taci_0107
PFAM: FeoA family protein; iron dependent repressor; SMART: iron dependent repressor; KEGG: dal:Dalk_2732 iron (metal) dependent repressor, DtxR family.
  
  
 0.581
Taci_1480
KEGG: rru:Rru_A2872 L-2-amino-thiazoline-4- carboxylic acid hydrolase.
 
    0.560
Taci_1605
PFAM: B3/4 domain protein; KEGG: asu:Asuc_1302 B3/4 domain-containing protein.
       0.507
Taci_0607
KEGG: pmr:PMI0791 CoA-binding protein.
  
    0.493
Taci_1687
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2734 ABC transporter related.
  
  
 0.463
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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