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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1646PFAM: Cupin 2 conserved barrel domain protein; KEGG: asu:Asuc_1498 cupin 2 domain-containing protein. (116 aa)    
Predicted Functional Partners:
Taci_1645
Hypothetical protein.
       0.773
Taci_1644
PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase; KEGG: mfa:Mfla_1686 chorismate mutase / prephenate dehydratase.
  
  
 0.737
Taci_0239
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcz:BCZK3809 GntR family transcriptional regulator.
  
    0.547
Taci_1641
PFAM: aldo/keto reductase; KEGG: gur:Gura_4373 2,5-didehydrogluconate reductase.
       0.455
Taci_1643
PFAM: iron-containing alcohol dehydrogenase; KEGG: gbm:Gbem_0781 iron-containing alcohol dehydrogenase.
       0.455
Taci_1642
PFAM: ADP-ribosylation/Crystallin J1; KEGG: bce:BC4485 putative cytoplasmic protein.
  
    0.450
Taci_0362
PFAM: Silent information regulator protein Sir2; KEGG: pca:Pcar_0631 Sir2 family NAD-dependent protein deacetylase.
  
    0.409
Taci_1249
Hypothetical protein; KEGG: aba:Acid345_4431 PEGA domain protein.
  
     0.404
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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