Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Taci_1647 | Taci_1648 | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; KEGG: ank:AnaeK_0326 transcriptional regulator, SARP family. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase. | 0.682 |
Taci_1647 | Taci_1649 | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; KEGG: ank:AnaeK_0326 transcriptional regulator, SARP family. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS1371 ABC transporter permease. | 0.682 |
Taci_1647 | Taci_1650 | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; KEGG: ank:AnaeK_0326 transcriptional regulator, SARP family. | KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein. | 0.682 |
Taci_1648 | Taci_1647 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase. | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; KEGG: ank:AnaeK_0326 transcriptional regulator, SARP family. | 0.682 |
Taci_1648 | Taci_1649 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS1371 ABC transporter permease. | 0.972 |
Taci_1648 | Taci_1650 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase. | KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein. | 0.970 |
Taci_1649 | Taci_1647 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS1371 ABC transporter permease. | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; KEGG: ank:AnaeK_0326 transcriptional regulator, SARP family. | 0.682 |
Taci_1649 | Taci_1648 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS1371 ABC transporter permease. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase. | 0.972 |
Taci_1649 | Taci_1650 | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS1371 ABC transporter permease. | KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein. | 0.992 |
Taci_1650 | Taci_1647 | KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein. | Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; KEGG: ank:AnaeK_0326 transcriptional regulator, SARP family. | 0.682 |
Taci_1650 | Taci_1648 | KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase. | 0.970 |
Taci_1650 | Taci_1649 | KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein. | PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS1371 ABC transporter permease. | 0.992 |