Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1648PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0232 ATPase. (223 aa)    
Predicted Functional Partners:
Taci_1649
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: wsu:WS1371 ABC transporter permease.
 
  
  0.972
Taci_1650
KEGG: dde:Dde_0234 ABC transporter, periplasmic substrate-binding protein.
 
  
  0.970
Taci_0012
KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.903
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.882
Taci_0243
PFAM: BioY protein; KEGG: sfu:Sfum_1749 BioY protein.
   
 
 0.778
Taci_0049
PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Precorrin-6x reductase CbiJ/CobK; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: dde:Dde_3181 precorrin-3 methyltransferase.
  
  
 0.719
Taci_1647
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; KEGG: ank:AnaeK_0326 transcriptional regulator, SARP family.
       0.682
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
 
    0.670
Taci_1153
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcy:Bcer98_0133 cobalt transporter ATP- binding subunit.
 
    
0.639
rpsI
PFAM: ribosomal protein S9; KEGG: mxa:MXAN_1994 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
  
 0.525
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.