STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1679PFAM: beta-lactamase domain protein; KEGG: azo:azo3526 flavoprotein. (263 aa)    
Predicted Functional Partners:
Taci_1680
PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: nis:NIS_1120 hypothetical protein.
 
     0.801
asnS
TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: afw:Anae109_2720 asparaginyl-tRNA synthetase.
       0.658
Taci_1678
PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; KEGG: sfu:Sfum_3264 phosphoenolpyruvate synthase.
       0.658
Taci_0007
Superoxide reductase; PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: gsu:GSU0720 desulfoferrodoxin ferrous iron- binding domain-containing protein.
 
  
 0.622
Taci_1324
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.599
Taci_1676
PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: dps:DP0218 cobyrinic acid A,C-diamide synthase (CobB).
 
     0.598
Taci_0779
PFAM: Metal-dependent hydrolase HDOD; metal- dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dal:Dalk_0653 metal dependent phosphohydrolase.
  
     0.557
Taci_1146
TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: sus:Acid_7452 SAF domain-containing protein.
  
     0.438
Taci_0665
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: bha:BH3621 flagellar hook-associated protein FlgK.
  
     0.401
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.