STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1691PFAM: cobalamin B12-binding domain protein; KEGG: lch:Lcho_2473 cobalamin B12-binding domain- containing protein. (339 aa)    
Predicted Functional Partners:
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
 
 0.814
Taci_1690
Diguanylate cyclase; KEGG: dal:Dalk_2836 response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
       0.773
Taci_0495
Uncharacterized metal-binding protein-like protein; KEGG: gsu:GSU0608 hypothetical protein.
 
    0.693
Taci_1688
PFAM: SMC domain protein; KEGG: mxa:MXAN_4513 hypothetical protein.
       0.631
Taci_1689
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_4514 metallophosphoesterase.
       0.631
Taci_1686
PFAM: ABC-3 protein; KEGG: dps:DP3062 Mn/Zn ABC transporter, permease.
  
    0.581
Taci_1685
Hypothetical protein.
       0.578
Taci_1687
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2734 ABC transporter related.
       0.578
Taci_1692
Hypothetical protein; KEGG: msl:Msil_1413 double-strand break repair protein AddB.
       0.555
Taci_1693
PFAM: UvrD/REP helicase; KEGG: ade:Adeh_2512 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
       0.555
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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