Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Taci_1693PFAM: UvrD/REP helicase; KEGG: ade:Adeh_2512 UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily. (1125 aa)    
Predicted Functional Partners:
Taci_1692
Hypothetical protein; KEGG: msl:Msil_1413 double-strand break repair protein AddB.
  
 
 0.995
recD2
Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
  
 
 0.882
Taci_1689
PFAM: metallophosphoesterase; KEGG: mxa:MXAN_4514 metallophosphoesterase.
  
  
 0.669
Taci_1688
PFAM: SMC domain protein; KEGG: mxa:MXAN_4513 hypothetical protein.
  
  
 0.658
Taci_1245
PFAM: OstA family protein; KEGG: gbm:Gbem_3347 organic solvent tolerance protein.
  
     0.654
Taci_0682
PFAM: outer membrane chaperone Skp (OmpH); KEGG: rce:RC1_1199 outer membrane protein OmpH precursor.
  
     0.605
Taci_1694
Diguanylate cyclase and metal dependent phosphohydrolase; KEGG: gur:Gura_3459 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; metal- dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein.
       0.600
Taci_1078
Hypothetical protein; KEGG: sfu:Sfum_0568 PpiC-type peptidyl-prolyl cis- trans isomerase.
 
     0.587
Taci_1079
DNA polymerase I; KEGG: bcy:Bcer98_3272 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; Helix-hairpin-helix domain protein class 2.
     
 0.571
Taci_1690
Diguanylate cyclase; KEGG: dal:Dalk_2836 response regulator receiver modulated diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein.
       0.555
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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