STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Taci_1701Hypothetical protein; KEGG: similar to plectin 1 isoform 3; K10388 plectin. (479 aa)    
Predicted Functional Partners:
Taci_1700
PFAM: protein of unknown function UPF0182; KEGG: gsu:GSU2333 hypothetical protein.
       0.534
Taci_1702
PFAM: aminotransferase class V; KEGG: dde:Dde_2744 aminotransferase, class V.
       0.522
Taci_1696
Hypothetical protein.
       0.427
Taci_1697
Hypothetical protein.
       0.427
Taci_1698
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: azo:azo3888 putative serine/threonine kinase.
       0.427
Taci_1699
PFAM: Stage II sporulation E family protein; KEGG: azo:azo3885 putative phosphoprotein phosphatase.
       0.427
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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