STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobSCobalamin-5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (250 aa)    
Predicted Functional Partners:
Taci_0049
PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Precorrin-6x reductase CbiJ/CobK; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: dde:Dde_3181 precorrin-3 methyltransferase.
 
  
 0.999
Taci_1719
Adenosylcobinamide-phosphateguanylyltransferase; PFAM: cobalbumin biosynthesis protein; KEGG: gur:Gura_4188 adenosylcobinamide-phosphate guanylyltransferase.
 
 
 0.997
Taci_0126
cob(I)alamin adenosyltransferase; KEGG: gme:Gmet_1573 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP.
 
 
 0.965
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.959
Taci_0552
TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: kpn:KPN_03215 propanediol utilization: B12 related; Belongs to the Cob(I)alamin adenosyltransferase family.
    
 0.929
Taci_0082
PFAM: cobalamin adenosyltransferase; KEGG: maq:Maqu_1230 cobalamin adenosyltransferase.
     
  0.900
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
  
 0.854
Taci_0055
PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: plu:plu2997 precorrin-8X methylmutase.
 
  
 0.850
Taci_0051
TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Methyltransferase type 12; Methyltransferase type 11; methyltransferase small; protein-L-isoaspartate(D- aspartate) O-methyltransferase; KEGG: dde:Dde_0803 precorrin-6Y C5,15- methyltransferase (decarboxylating).
 
  
 0.828
Taci_0048
PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ppd:Ppro_3502 precorrin-2 C20- methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.821
Your Current Organism:
Thermanaerovibrio acidaminovorans
NCBI taxonomy Id: 525903
Other names: T. acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans DSM 6589, Thermanaerovibrio acidaminovorans str. DSM 6589, Thermanaerovibrio acidaminovorans strain DSM 6589
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