STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0034KEGG: hypothetical protein. (272 aa)    
Predicted Functional Partners:
Tter_1415
PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: molybdenum hydroxylase accessory protein, YgfJ family; K07141.
 
     0.757
Tter_1417
KEGG: ppd:Ppro_1552 molybdopterin binding domain- containing protein.
 
     0.708
Tter_2236
PFAM: protein of unknown function DUF182; KEGG: msl:Msil_0236 protein of unknown function DUF182.
 
  
 0.662
Tter_0033
KEGG: bcb:BCB4264_A0071 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.569
Tter_2354
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: maq:Maqu_0905 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
  
 0.489
Tter_0686
TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: sat:SYN_02931 putative cytoplasmic protein.
 
     0.477
Tter_2234
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: aeh:Mlg_1563 carbon monoxide dehydrogenase, small subunit.
 
  
 0.443
Tter_0032
KEGG: bsu:BSU04320 hypothetical protein.
       0.413
Tter_0255
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dde:Dde_1267 peptidase.
 
   
 0.403
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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