STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0100PFAM: ADP-ribosylation/Crystallin J1; KEGG: mes:Meso_1097 hypothetical protein. (699 aa)    
Predicted Functional Partners:
Tter_2502
PFAM: extracellular solute-binding protein family 1; KEGG: mes:Meso_1094 extracellular solute-binding protein, family 1.
  
     0.711
Tter_0211
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
  
     0.607
Tter_2468
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
  
     0.607
Tter_2318
KEGG: sus:Acid_1828 hypothetical protein.
  
     0.560
Tter_0099
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: dal:Dalk_0946 hydroxypyruvate reductase.
       0.548
Tter_0622
KEGG: smd:Smed_2312 hypothetical protein.
  
     0.463
Tter_1809
KEGG: scl:sce2260 putative secreted protein.
  
     0.453
Tter_0276
PFAM: protein of unknown function DUF214; KEGG: hypothetical protein.
  
     0.451
Tter_1999
PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mlr7000 ABC transporter, periplasmic binding-protein.
  
     0.424
Tter_2525
PFAM: glycoside hydrolase family 38; Glycoside hydrolase family 38 central region; KEGG: hypothetical protein; K01191 alpha- mannosidase.
  
     0.416
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.