Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_0103TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: gur:Gura_3690 DNA protecting protein DprA. (365 aa)    
Predicted Functional Partners:
Tter_0906
Mg chelatase, subunit ChlI; KEGG: gsu:GSU0489 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
 0.916
Tter_1047
KEGG: sat:SYN_01338 amidophosphoribosyltransferase family protein.
 
 
 0.873
Tter_1411
PFAM: peptidase A24A prepilin type IV; KEGG: ank:AnaeK_0671 peptidase A24A domain protein.
  
  
 0.788
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
   
 0.763
Tter_1667
TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: sat:SYN_02533 metallo-beta-lactamase superfamily protein.
 
  
 0.762
Tter_1272
PFAM: protein of unknown function UPF0102; KEGG: gme:Gmet_2864 hypothetical protein; Belongs to the UPF0102 family.
 
  
 0.625
Tter_0779
TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: aba:Acid345_2223 single-strand binding protein.
 
  
 0.598
Tter_1630
TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: bha:BH3032 DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.571
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
   
 0.555
Tter_0104
PFAM: glycosyl transferase family 2; KEGG: ppd:Ppro_2693 glycosyl transferase family protein.
       0.546
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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