STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0149PFAM: glycosyl transferase family 9; KEGG: bam:Bamb_5648 glycosyl transferase family protein. (352 aa)    
Predicted Functional Partners:
Tter_0150
PFAM: glycosyl transferase group 1; KEGG: tbd:Tbd_0743 glycosyltransferase.
  
 0.964
Tter_0145
TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; Haloacid dehalogenase domain protein hydrolase; KEGG: D,D-heptose 1,7-bisphosphate phosphatase; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
   
 0.944
hldE
Cytidyltransferase-related domain protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.942
Tter_0151
PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A1795 phosphoheptose isomerase.
  
 0.936
gmhA
Sugar isomerase (SIS); Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
 
   
 0.908
Tter_0154
PFAM: sugar isomerase (SIS); KEGG: sus:Acid_2237 sugar isomerase (SIS).
 
   
 0.894
Tter_0152
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nmu:Nmul_A1794 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.849
Tter_0148
PFAM: glycosyl transferase family 9; KEGG: eba:ebA6912 ADP-heptose--LPS heptosyltransferase II.
 
    
0.800
Tter_0147
PFAM: glycosyl transferase family 9; KEGG: tbd:Tbd_0742 ADP-heptose--LPS heptosyltransferase II.
 
    
0.799
Tter_0448
PFAM: glycosyl transferase family 2; KEGG: azo:azo1719 hypothetical protein.
 
  
 0.778
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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