Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_0155PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: vei:Veis_3268 xylose isomerase domain protein TIM barrel. (332 aa)    
Predicted Functional Partners:
Tter_0156
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bha:BH0710 hypothetical protein.
 
    0.886
Tter_0157
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_2336 short-chain dehydrogenase/reductase SDR.
       0.558
Tter_0158
KEGG: glucose/sorbosone dehydrogenase-like protein.
       0.497
Tter_0153
PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: sus:Acid_0418 GHMP kinase.
       0.456
Tter_0154
PFAM: sugar isomerase (SIS); KEGG: sus:Acid_2237 sugar isomerase (SIS).
       0.456
Tter_0152
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nmu:Nmul_A1794 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.442
Tter_1938
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: aba:Acid345_1695 sugar phosphate isomerases/epimerases.
  
     0.420
Tter_2694
PFAM: aminoglycoside phosphotransferase; KEGG: sme:SMc04360 hypothetical protein.
  
     0.412
Tter_0150
PFAM: glycosyl transferase group 1; KEGG: tbd:Tbd_0743 glycosyltransferase.
       0.407
Tter_0151
PFAM: glycosyl transferase group 1; KEGG: nmu:Nmul_A1795 phosphoheptose isomerase.
       0.407
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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