STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0179PFAM: aminoglycoside phosphotransferase; KEGG: lpp:lpp1448 spectinomycin phosphotransferase. (334 aa)    
Predicted Functional Partners:
Tter_0180
PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2074 acetyltransferase.
       0.714
Tter_0177
PFAM: peptidase M16 domain protein; KEGG: pla:Plav_0678 peptidase M16 domain-containing protein; Belongs to the peptidase M16 family.
  
  
 0.548
Tter_0178
PFAM: peptidase M16 domain protein; KEGG: sus:Acid_7201 peptidase M16 domain-containing protein.
  
  
 0.548
Tter_0181
PFAM: glycoside hydrolase family 3 domain protein; KEGG: mmw:Mmwyl1_0214 glycoside hydrolase family 3 protein; Belongs to the glycosyl hydrolase 3 family.
  
    0.513
Tter_0182
PFAM: O-methyltransferase family 3; KEGG: scl:sce1553 O-methyltransferase family protein.
 
     0.510
Tter_2188
PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; aminoglycoside phosphotransferase; KEGG: ott:OTT_0547 putative streptomycin-6- phosphotransferase.
 
     0.441
Tter_1438
PFAM: ABC-2 type transporter; KEGG: pag:PLES_25922 inner membrane permease protein.
  
     0.422
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.