STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0182PFAM: O-methyltransferase family 3; KEGG: scl:sce1553 O-methyltransferase family protein. (198 aa)    
Predicted Functional Partners:
Tter_2173
PFAM: Methyltransferase type 11; methyltransferase small; Methionine biosynthesis MetW protein; Cyclopropane- fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: bha:BH2887 hypothetical protein.
      0.727
Tter_0181
PFAM: glycoside hydrolase family 3 domain protein; KEGG: mmw:Mmwyl1_0214 glycoside hydrolase family 3 protein; Belongs to the glycosyl hydrolase 3 family.
       0.697
Tter_0209
KEGG: cbd:CBUD_1719 hypothetical peptidase.
  
  
 0.559
Tter_0179
PFAM: aminoglycoside phosphotransferase; KEGG: lpp:lpp1448 spectinomycin phosphotransferase.
 
     0.510
Tter_0180
PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2074 acetyltransferase.
  
    0.488
Tter_0299
PFAM: O-methyltransferase family 3; KEGG: aba:Acid345_3436 O-methyltransferase, family 3.
  
     0.445
Tter_2336
PFAM: alpha-L-rhamnosidase; KEGG: sus:Acid_3742 alpha-L-rhamnosidase.
  
    0.439
Tter_0183
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
       0.438
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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