STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0183PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein. (429 aa)    
Predicted Functional Partners:
Tter_0184
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_4016 binding-protein-dependent transport systems inner membrane component.
  0.990
Tter_0185
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1866 sugar transport system (permease) (binding protein dependent transporter).
 
   0.873
Tter_2614
PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_1702 extracellular solute-binding protein family 1.
  
     0.732
Tter_2216
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20969 putative sugar uptake ABC transporter permease protein.
  
   0.666
Tter_0263
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
 
   0.664
Tter_0507
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
 
   0.663
Tter_2473
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein.
  
   0.642
Tter_2506
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20970 putative sugar uptake ABC transporter permease protein.
 
   0.642
Tter_2523
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1865 sugar transport system (permease) (binding protein dependent transporter).
 
   0.629
Tter_2452
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1866 sugar transport system (permease) (binding protein dependent transporter).
  
   0.625
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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