STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0208PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3845 ABC transporter (substrate-binding protein). (454 aa)    
Predicted Functional Partners:
Tter_0206
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3847 ABC transporter (permease).
 
  0.992
Tter_0207
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3846 ABC transporter (permease).
 
  0.985
Tter_0973
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bca:BCE_4067 sugar ABC transporter, ATP- binding protein.
  
  0.880
Tter_2491
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:RL2899 putative ATP-binding component of ABC transporter; Belongs to the ABC transporter superfamily.
  
  0.880
Tter_2492
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_2015 ABC transporter related; Belongs to the ABC transporter superfamily.
  
  0.880
Tter_2473
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein.
  
   0.642
Tter_2657
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL2327 putative transmembrane component of ABC transporter.
  
   0.487
Tter_2658
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atu:Atu3238 ABC transporter, membrane spanning protein (sugar).
  
   0.457
Tter_2053
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02026 multiple sugar transport system permease protein.
  
   0.445
Tter_0209
KEGG: cbd:CBUD_1719 hypothetical peptidase.
       0.434
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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