Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tter_0209KEGG: cbd:CBUD_1719 hypothetical peptidase. (313 aa)    
Predicted Functional Partners:
Tter_1588
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
   0.813
Tter_0210
KEGG: smd:Smed_2467 hypothetical protein.
       0.780
Tter_0211
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
       0.727
Tter_0212
PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein.
       0.727
Tter_2744
KEGG: hypothetical protein.
 
     0.546
Tter_0182
PFAM: O-methyltransferase family 3; KEGG: scl:sce1553 O-methyltransferase family protein.
  
  
 0.536
Tter_0299
PFAM: O-methyltransferase family 3; KEGG: aba:Acid345_3436 O-methyltransferase, family 3.
  
  
 0.536
Tter_1914
Hypothetical protein; KEGG: rpc:RPC_3499 O-methyltransferase family protein.
  
  
 0.536
nuoC
NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
   0.509
Tter_1773
KEGG: bha:BH1004 hypothetical protein.
  
     0.502
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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