STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0209KEGG: cbd:CBUD_1719 hypothetical peptidase. (313 aa)    
Predicted Functional Partners:
Tter_0210
KEGG: smd:Smed_2467 hypothetical protein.
       0.782
Tter_0211
PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein.
       0.727
Tter_0212
PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein.
       0.727
Tter_0182
PFAM: O-methyltransferase family 3; KEGG: scl:sce1553 O-methyltransferase family protein.
  
  
 0.559
Tter_0299
PFAM: O-methyltransferase family 3; KEGG: aba:Acid345_3436 O-methyltransferase, family 3.
  
  
 0.559
Tter_1914
Hypothetical protein; KEGG: rpc:RPC_3499 O-methyltransferase family protein.
  
  
 0.559
Tter_2744
KEGG: hypothetical protein.
 
     0.547
Tter_1773
KEGG: bha:BH1004 hypothetical protein.
  
     0.502
Tter_0213
KEGG: afw:Anae109_3322 hypothetical protein.
       0.479
Tter_2025
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU28750 sugar-binding protein.
  
     0.450
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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