Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tter_0209 | Tter_0210 | KEGG: cbd:CBUD_1719 hypothetical peptidase. | KEGG: smd:Smed_2467 hypothetical protein. | 0.782 |
Tter_0209 | Tter_0211 | KEGG: cbd:CBUD_1719 hypothetical peptidase. | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | 0.727 |
Tter_0209 | Tter_0212 | KEGG: cbd:CBUD_1719 hypothetical peptidase. | PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein. | 0.727 |
Tter_0210 | Tter_0209 | KEGG: smd:Smed_2467 hypothetical protein. | KEGG: cbd:CBUD_1719 hypothetical peptidase. | 0.782 |
Tter_0210 | Tter_0211 | KEGG: smd:Smed_2467 hypothetical protein. | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | 0.727 |
Tter_0210 | Tter_0212 | KEGG: smd:Smed_2467 hypothetical protein. | PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein. | 0.727 |
Tter_0211 | Tter_0209 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | KEGG: cbd:CBUD_1719 hypothetical peptidase. | 0.727 |
Tter_0211 | Tter_0210 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | KEGG: smd:Smed_2467 hypothetical protein. | 0.727 |
Tter_0211 | Tter_0212 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein. | 0.781 |
Tter_0211 | Tter_0622 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | KEGG: smd:Smed_2312 hypothetical protein. | 0.775 |
Tter_0211 | Tter_1903 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: rle:pRL100274 putative fucosidase. | 0.701 |
Tter_0211 | Tter_1987 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | PFAM: ADP-ribosylation/Crystallin J1; KEGG: hypothetical protein. | 0.705 |
Tter_0211 | Tter_2063 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | PFAM: ADP-ribosylation/Crystallin J1; KEGG: oan:Oant_4445 ADP-ribosylation/crystallin J1. | 0.746 |
Tter_0211 | Tter_2312 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L- fucosidase); KEGG: xcv:XCV3207 alpha-L-fucosidase. | 0.720 |
Tter_0211 | Tter_2461 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sew:SeSA_A3313 beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. | 0.925 |
Tter_0211 | Tter_2468 | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | 0.903 |
Tter_0212 | Tter_0209 | PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein. | KEGG: cbd:CBUD_1719 hypothetical peptidase. | 0.727 |
Tter_0212 | Tter_0210 | PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein. | KEGG: smd:Smed_2467 hypothetical protein. | 0.727 |
Tter_0212 | Tter_0211 | PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein. | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | 0.781 |
Tter_0622 | Tter_0211 | KEGG: smd:Smed_2312 hypothetical protein. | PFAM: protein of unknown function DUF608; KEGG: sus:Acid_5570 hypothetical protein. | 0.775 |
page 1 of 3