STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Tter_0235CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. (146 aa)    
Predicted Functional Partners:
Tter_0238
PFAM: cytochrome c assembly protein; KEGG: aba:Acid345_2302 cytochrome c assembly protein.
 
 
 0.984
Tter_0237
PFAM: cytochrome c-type biogenesis protein CcmB; ABC-2 type transporter; KEGG: mgm:Mmc1_3499 cytochrome c-type biogenesis protein CcmB.
 
 
 0.981
Tter_1507
PFAM: cytochrome c assembly protein; KEGG: sus:Acid_4232 cytochrome c assembly protein.
 
 
 0.872
Tter_1508
Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
 
  
 0.828
Tter_1491
PFAM: cytochrome c assembly protein; KEGG: ccsA; cytochrome c biogenesis protein.
  
 
 0.826
Tter_0236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4236 heme exporter protein CcmA.
 
     0.736
Tter_0240
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; KEGG: mxa:MXAN_3252 thiol:disulfide interchange protein DsbE.
 
     0.660
Tter_0239
Hypothetical protein.
       0.648
Tter_0234
TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: pap:PSPA7_2488 hypothetical protein.
       0.644
Tter_0233
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: dol:Dole_2627 methyltransferase type 11.
     
 0.582
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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