STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0238PFAM: cytochrome c assembly protein; KEGG: aba:Acid345_2302 cytochrome c assembly protein. (239 aa)    
Predicted Functional Partners:
Tter_0237
PFAM: cytochrome c-type biogenesis protein CcmB; ABC-2 type transporter; KEGG: mgm:Mmc1_3499 cytochrome c-type biogenesis protein CcmB.
 
 0.998
Tter_0235
CcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.983
Tter_0236
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_4236 heme exporter protein CcmA.
 
  
  0.966
Tter_1506
PFAM: CcmE/CycJ protein; KEGG: dds:Ddes_2369 cytochrome c-type biogenesis protein CcmE.
 
 
 0.954
Tter_1507
PFAM: cytochrome c assembly protein; KEGG: sus:Acid_4232 cytochrome c assembly protein.
 
  
 0.830
Tter_1508
Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
 
   
 0.817
Tter_0239
Hypothetical protein.
       0.773
Tter_0240
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; KEGG: mxa:MXAN_3252 thiol:disulfide interchange protein DsbE.
 
  
 0.770
Tter_1490
ResB-like protein required for cytochrome c biosynthesis; KEGG: gsu:GSU0613 ResB-like family protein.
  
  
 0.723
Tter_0241
PFAM: periplasmic binding protein; KEGG: pzu:PHZ_c1916 probable periplasmic substrate- binding protein.
       0.641
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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