STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0254PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: nis:NIS_1151 bacterioferritin. (170 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
  0.900
Tter_0221
PFAM: polysaccharide biosynthesis protein; KEGG: bat:BAS4308 stage V sporulation protein B.
  
    0.790
Tter_0551
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
  
     0.626
Tter_0543
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
  
     0.622
Tter_0255
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dde:Dde_1267 peptidase.
       0.596
Tter_2037
KEGG: hypothetical protein.
  
     0.564
Tter_2677
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: pau:PA14_15570 hypothetical protein.
  
     0.552
Tter_0253
PFAM: putative RNA methylase; Methyltransferase type 11; KEGG: THUMPD3; THUMP domain containing 3.
       0.500
Tter_2143
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: jan:Jann_0506 pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
     0.463
Tter_0681
Hypothetical protein; KEGG: dal:Dalk_0300 response regulator receiver protein.
  
     0.434
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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