STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0269PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: scl:sce8243 fumarylacetoacetase family protein. (280 aa)    
Predicted Functional Partners:
Tter_1958
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: sus:Acid_5866 dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.949
Tter_0212
PFAM: Aldehyde Dehydrogenase; KEGG: bsu:BSU02470 hypothetical protein.
  
 
 0.911
Tter_0560
PFAM: Aldehyde Dehydrogenase; KEGG: aba:Acid345_1459 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.911
Tter_0268
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB1748 short chain dehydrogenase.
       0.773
Tter_0270
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ypm:YP_1303 putative D-isomer specific 2- hydroxyacid dehydrogenase family protein.
  
    0.741
Tter_0271
PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter.
  
    0.737
Tter_0895
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_1577 xylose isomerase domain- containing protein.
  
     0.730
Tter_0621
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sfu:Sfum_1980 xylose isomerase domain protein TIM barrel.
  
     0.689
Tter_1906
KEGG: bcm:Bcenmc03_6969 hypothetical protein.
  
     0.670
Tter_2345
KEGG: cak:Caul_2402 hypothetical protein.
  
     0.633
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.