STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0274PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: probable dehydrogenase. (345 aa)    
Predicted Functional Partners:
Tter_0273
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sus:Acid_1947 xylose isomerase domain- containing protein.
 
    0.839
Tter_2313
PFAM: oxidoreductase domain protein; Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2339 oxidoreductase domain- containing protein.
  
    0.786
Tter_0541
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: smd:Smed_5686 glycosyl transferase group 1.
  
     0.774
Tter_1905
PFAM: oxidoreductase domain protein; KEGG: oan:Oant_3060 oxidoreductase domain protein.
  
     0.774
Tter_1925
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; Oxidoreductase domain; KEGG: mes:Meso_4484 oxidoreductase-like.
  
     0.774
Tter_2134
PFAM: oxidoreductase domain protein; KEGG: bha:BH0708 hypothetical protein.
  
     0.771
Tter_1997
PFAM: oxidoreductase domain protein; KEGG: acr:Acry_1061 oxidoreductase domain- containing protein.
  
     0.764
Tter_0272
PFAM: aldo/keto reductase; KEGG: ret:RHE_CH00494 L-fucose dehydrogenase protein.
  
    0.607
Tter_2265
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rec:RHECIAT_CH0002098 putative dehydrogenase protein.
  
     0.601
Tter_0268
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB1748 short chain dehydrogenase.
  
    0.440
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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