STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0276PFAM: protein of unknown function DUF214; KEGG: hypothetical protein. (963 aa)    
Predicted Functional Partners:
Tter_0277
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_02006 lipoprotein releasing system ATP-binding protein LolD.
 
 
 0.982
Tter_0278
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo3286 ABC transporter ATP-binding protein.
 
 
 0.959
Tter_0275
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_3531 secretion protein HlyD.
 
 
 0.883
Tter_2175
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU34700 hypothetical protein.
  
 
 0.800
Tter_2519
KEGG: tbd:Tbd_0735 hypothetical protein.
  
     0.713
Tter_0279
Hypothetical protein.
       0.558
Tter_2318
KEGG: sus:Acid_1828 hypothetical protein.
  
     0.511
Tter_2218
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1864 hypothetical protein.
  
     0.507
Tter_2278
PFAM: alpha amylase catalytic region; glycoside hydrolase starch-binding; Fibronectin type III domain protein; SMART: alpha amylase catalytic sub domain; Fibronectin type III domain protein; KEGG: vvu:VV1_2227 maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
  
     0.507
Tter_2499
PFAM: ADP-ribosylation/Crystallin J1; KEGG: mes:Meso_1097 hypothetical protein.
  
     0.492
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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