STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0280PFAM: blue (type 1) copper domain protein; KEGG: predicted protein. (188 aa)    
Predicted Functional Partners:
Tter_0158
KEGG: glucose/sorbosone dehydrogenase-like protein.
      0.664
Tter_0281
PFAM: protein of unknown function DUF82; KEGG: acp:A2cp1_3352 protein of unknown function DUF82.
       0.634
Tter_0282
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: aba:Acid345_2371 ABC transporter, ATPase subunit.
       0.580
Tter_0283
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sus:Acid_3848 ABC transporter related.
       0.580
Tter_2537
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_2926 Rieske (2Fe-2S) domain- containing protein.
  
 
 0.438
Tter_2238
PFAM: multicopper oxidase type 3; multicopper oxidase type 1; blue (type 1) copper domain protein; multicopper oxidase type 2; KEGG: hypothetical protein.
   
 
 0.433
Tter_0532
PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: bsu:BSU06300 spore coat protein (outer).
   
 
 0.402
Tter_2149
KEGG: oca:OCAR_7249 copper-containing nitrite reductase; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; multicopper oxidase type 2.
   
 
 0.402
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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