STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0316TIGRFAM: lysine biosynthesis enzyme LysX; alpha-L- glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: afw:Anae109_2113 alpha-L-glutamate ligase; Belongs to the RimK family. (282 aa)    
Predicted Functional Partners:
lysZ
Acetylglutamate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily.
 
  
 0.990
Tter_0318
TIGRFAM: lysine biosynthesis enzyme LysX; alpha-L- glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; KEGG: ade:Adeh_1691 SSU ribosomal protein S6P modification protein; Belongs to the RimK family.
 
  
 
0.977
Tter_0317
TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; PFAM: peptidase M20; KEGG: gbm:Gbem_3178 peptidase M20.
 
  
 0.942
Tter_0315
TIGRFAM: lysine biosynthesis protein LysW.
 
   
 0.900
Tter_0319
KEGG: gur:Gura_1051 N-acetyl-gamma-glutamyl- phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.882
Tter_0321
TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bha:BH2897 acetylornithine aminotransferase.
 
   
 0.673
Tter_0322
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: jan:Jann_1468 oxidoreductase-like.
       0.541
Tter_0323
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ypk:y0252 hypothetical protein.
       0.541
argG-2
KEGG: sfu:Sfum_0061 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.533
argH
KEGG: fph:Fphi_0553 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase.
     
 0.523
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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