STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tter_0372PFAM: heat shock protein Hsp20; KEGG: afw:Anae109_3080 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (141 aa)    
Predicted Functional Partners:
Tter_1569
PFAM: heat shock protein Hsp20; KEGG: Os01g0136100; hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.549
Tter_0373
PFAM: protein of unknown function DUF101; KEGG: cbd:CBUD_1267 hypothetical cytosolic protein.
       0.536
rtcB
PFAM: protein of unknown function UPF0027; KEGG: nmu:Nmul_A0903 hypothetical protein; Belongs to the RtcB family.
       0.502
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.495
Tter_1349
PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: bha:BH0103 class III stress response-related ATPase; Belongs to the ClpA/ClpB family.
  
 
 0.495
Tter_1399
PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: acp:A2cp1_0414 ATP-dependent chaperone ClpB; Belongs to the ClpA/ClpB family.
  
 
 0.495
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.465
Tter_2671
PFAM: ABC-2 type transporter; KEGG: sdy:SDY_0811 hypothetical protein.
  
     0.455
Tter_0463
PFAM: heat shock protein Hsp20; KEGG: gsu:GSU0538 HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.432
Tter_0539
PFAM: heat shock protein Hsp20; KEGG: aba:Acid345_4766 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
     0.413
Your Current Organism:
Thermobaculum terrenum
NCBI taxonomy Id: 525904
Other names: T. terrenum ATCC BAA-798, Thermobaculum terrenum ATCC BAA-798, Thermobaculum terrenum YNP1, Thermobaculum terrenum str. ATCC BAA-798, Thermobaculum terrenum strain ATCC BAA-798
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